rna-seq-snakemake

bioinformatics

Snakemake based pipeline for RNA-Seq analysis

How to download and setup rna-seq-snakemake

Open terminal and run command

git clone https://github.com/saketkc/rna-seq-snakemake.git

git clone is used to create a copy or clone of rna-seq-snakemake repositories. You pass git clone a repository URL.
it supports a few different network protocols and corresponding URL formats.

Also you may download zip file with rna-seq-snakemake https://github.com/saketkc/rna-seq-snakemake/archive/master.zip

Or simply clone rna-seq-snakemake with SSH

[email protected]:saketkc/rna-seq-snakemake.git

If you have some problems with rna-seq-snakemake

You may open issue on rna-seq-snakemake support forum (system) here: https://github.com/saketkc/rna-seq-snakemake/issues

Similar to rna-seq-snakemake repositories

Here you may see rna-seq-snakemake alternatives and analogs

cs-video-courses fastp dash deepvariant awesome-single-cell nextflow bwa khmer Awesome-Bioinformatics galaxy gatk seqtk bioconda-recipes MultiQC hail minimap2 scipipe nucleus bioawk cromwell vsearch sambamba jbrowse bionode csvtk biojava deepTools circosJS containers salmon