How to download and setup safepy
Open terminal and run command
git clone https://github.com/baryshnikova-lab/safepy.git
git clone is used to create a copy or clone of safepy repositories.
You pass git clone a repository URL. it supports a few different network protocols and corresponding URL formats.
Also you may download zip file with safepy https://github.com/baryshnikova-lab/safepy/archive/master.zip
Or simply clone safepy with SSH
[email protected]:baryshnikova-lab/safepy.git
If you have some problems with safepy
You may open issue on safepy support forum (system) here: https://github.com/baryshnikova-lab/safepy/issuesSimilar to safepy repositories
Here you may see safepy alternatives and analogs
cs-video-courses fastp dash deepvariant awesome-single-cell nextflow bwa khmer Awesome-Bioinformatics galaxy gatk seqtk bioconda-recipes MultiQC hail minimap2 scipipe nucleus bioawk cromwell vsearch sambamba jbrowse bionode csvtk biojava deepTools circosJS containers salmon