How to download and setup shapeit5
Open terminal and run command
git clone https://github.com/odelaneau/shapeit5.git
git clone is used to create a copy or clone of shapeit5 repositories.
You pass git clone a repository URL. it supports a few different network protocols and corresponding URL formats.
Also you may download zip file with shapeit5 https://github.com/odelaneau/shapeit5/archive/master.zip
Or simply clone shapeit5 with SSH
[email protected]:odelaneau/shapeit5.git
If you have some problems with shapeit5
You may open issue on shapeit5 support forum (system) here: https://github.com/odelaneau/shapeit5/issuesSimilar to shapeit5 repositories
Here you may see shapeit5 alternatives and analogs
cs-video-courses fastp dash deepvariant awesome-single-cell nextflow bwa khmer Awesome-Bioinformatics galaxy gatk seqtk bioconda-recipes MultiQC hail minimap2 scipipe nucleus bioawk cromwell vsearch sambamba jbrowse bionode csvtk biojava deepTools circosJS containers salmon