sshash

bioinformatics

A compressed, associative, exact, and weighted dictionary for k-mers.

How to download and setup sshash

Open terminal and run command

git clone https://github.com/jermp/sshash.git

git clone is used to create a copy or clone of sshash repositories. You pass git clone a repository URL.
it supports a few different network protocols and corresponding URL formats.

Also you may download zip file with sshash https://github.com/jermp/sshash/archive/master.zip

Or simply clone sshash with SSH

[email protected]:jermp/sshash.git

If you have some problems with sshash

You may open issue on sshash support forum (system) here: https://github.com/jermp/sshash/issues

Similar to sshash repositories

Here you may see sshash alternatives and analogs

cs-video-courses fastp dash deepvariant awesome-single-cell nextflow bwa khmer Awesome-Bioinformatics galaxy gatk seqtk bioconda-recipes MultiQC hail minimap2 scipipe nucleus bioawk cromwell vsearch sambamba jbrowse bionode csvtk biojava deepTools circosJS containers salmon