16 Forks
35 Stars
35 Watchers

taxadb

:hatching_chick: locally query the ncbi taxonomy

How to download and setup taxadb

Open terminal and run command
git clone https://github.com/HadrienG/taxadb.git
git clone is used to create a copy or clone of taxadb repositories. You pass git clone a repository URL.
it supports a few different network protocols and corresponding URL formats.

Also you may download zip file with taxadb https://github.com/HadrienG/taxadb/archive/master.zip

Or simply clone taxadb with SSH
[email protected]:HadrienG/taxadb.git

If you have some problems with taxadb

You may open issue on taxadb support forum (system) here: https://github.com/HadrienG/taxadb/issues

Similar to taxadb repositories

Here you may see taxadb alternatives and analogs

 cs-video-courses    fastp    dash    deepvariant    awesome-single-cell    nextflow    bwa    khmer    Awesome-Bioinformatics    galaxy    gatk    seqtk    bioconda-recipes    MultiQC    hail    minimap2    scipipe    nucleus    bioawk    cromwell    vsearch    sambamba    jbrowse    bionode    csvtk    biojava    deepTools    circosJS    containers    salmon