How to download and setup gatk-sv
Open terminal and run command
git clone https://github.com/broadinstitute/gatk-sv.git
git clone is used to create a copy or clone of gatk-sv repositories.
You pass git clone a repository URL. it supports a few different network protocols and corresponding URL formats.
Also you may download zip file with gatk-sv https://github.com/broadinstitute/gatk-sv/archive/master.zip
Or simply clone gatk-sv with SSH
[email protected]:broadinstitute/gatk-sv.git
If you have some problems with gatk-sv
You may open issue on gatk-sv support forum (system) here: https://github.com/broadinstitute/gatk-sv/issuesSimilar to gatk-sv repositories
Here you may see gatk-sv alternatives and analogs
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