configs

bioinformatics

Config files used to define parameters specific to compute environments at different Institutions

How to download and setup configs

Open terminal and run command

git clone https://github.com/nf-core/configs.git

git clone is used to create a copy or clone of configs repositories. You pass git clone a repository URL.
it supports a few different network protocols and corresponding URL formats.

Also you may download zip file with configs https://github.com/nf-core/configs/archive/master.zip

Or simply clone configs with SSH

[email protected]:nf-core/configs.git

If you have some problems with configs

You may open issue on configs support forum (system) here: https://github.com/nf-core/configs/issues

Similar to configs repositories

Here you may see configs alternatives and analogs

cs-video-courses fastp dash deepvariant awesome-single-cell nextflow bwa khmer Awesome-Bioinformatics galaxy gatk seqtk bioconda-recipes MultiQC hail minimap2 scipipe nucleus bioawk cromwell vsearch sambamba jbrowse bionode csvtk biojava deepTools circosJS containers salmon